DIA-MS data processing and analysis

Advancing Scientific Discovery Through Proteomics

Advanced DIA mass spectrometry analysis solution for proteomics research. Accelerate your drug discovery and protein function studies with our cutting-edge software.

SynapSpec showing a finished run: precursor, peptide and protein-group counts, and the same three counts per raw file

Example run

261,903

precursors identified

17,831

protein groups

7h 14m

wall clock, 6 DIA files

≤ 0.083

median log₂ ratio deviation from target

LFQBench on an Orbitrap Astral · 6 files, two conditions × 3 replicates · AWS c7i.8xlarge · run 2026-07-22

SynapSpec DIA Analysis Solution

Comprehensive software solution for DIA-MS data processing and analysis in proteomics research.

Easy Installation

One-click installer with automatic dependency management. Get started in minutes, not hours.

Cross-Platform Support

Works seamlessly on Windows, macOS, and Linux. Same powerful features across all platforms.

Deep Learning Optimization

Advanced AI algorithms optimize mass spectrometry workflows for maximum accuracy and speed.

Intuitive Interface

Clean, user-friendly interface designed for both beginners and experts. No complex configuration needed.

Real-time Processing

Process and analyze data in real-time with lightning-fast performance and instant feedback.

Automated Workflows

Smart automation handles repetitive tasks, letting you focus on discovery and insights.

System Requirements

Operating System
Windows: Windows 10, 11, or Server 2016/2019/2022 (64-bit)
macOS: macOS 10.14 or higher
Linux: Ubuntu 20.04 LTS or higher
Processor
Minimum: 4 cores
Recommended: Intel or AMD CPU with 16 cores or more
Memory
Minimum: 16 GB RAM
Recommended: 32 GB RAM or more
Note: 4 GB RAM per thread for optimal performance
Storage
Installation: 3 GB available disk space
Data Processing: 2 TB or more (2x dataset size recommended)
Recommended: SSD for improved processing speed
Software Dependencies
.NET 8.0 or higher
Mono

Ready to Try SynapSpec?

Download our DIA analysis solution or reach out to discuss how it can advance your proteomics research.